Yeah it also says don’t cut for stones (kidney stones), but I don’t see us casting urology out of medicine and letting people die of ureter obstructions. Doctors also don’t generally worship Apollo anymore, to the best of my knowledge.
Turns out standards of care and what is possible or safest have evolved since ancient Greece.
Doctors don’t take the literal original hipppcratic oath. There’s a ton of junk in there no one would want doctors to follow. It’s most common for each medical student class to create their own oath in the spirit of the hipppcratic oath when entering medical school, and then take that, or use a modernized version. And yes, vowing to do no abortions would absolutely conflict with “do no harm” in the modern age, and would lead to the needless suffering and death of pregnant individuals.