elduvelle_neuro, to random
@elduvelle_neuro@neuromatch.social avatar

What do who record raw data from many channels (, …) do for data backup and storage? I just bought 2 x 4Tb external drives and it looks like they won’t be enough (at all). Is there a cheap and reliable AND huge storage way to do this?

elduvelle_neuro, to random
@elduvelle_neuro@neuromatch.social avatar

What’s your best guide on extracellular recordings shapes to know if you’re recording from soma, axon, dendrite etc.? (Most interested about of course)

elduvelle_neuro, to Neuroscience
@elduvelle_neuro@neuromatch.social avatar

question:

What is the smallest optimal distance between independent in dorsal CA1 (so that you don’t record from the same neuron in adjacent tetrodes and also movement of one doesn’t influence the movement of others)?
Say, using 12.7 μm diameter wire?

kevinbolding, to Neuroscience

If MINI2P is good and open-source and reasonable cost-wise.. what reason would anyone have for pursuing 1P GRIN lens miniscope imaging any further? Any thoughts?

I haven't dug much further yet but my main hesitance would be just that I haven't seen it set up and used in labs outside of the developers' yet. Often there are implicit tricks and expertise that turn out to be important when transferring a technique.

elduvelle,
@elduvelle@neuromatch.social avatar

@kevinbolding are you not on the slack? It can be very useful for this kind of questions!

https://neuromethods.slack.com/

Let me know if you’d like an invite link!

elduvelle_neuro, to random
@elduvelle_neuro@neuromatch.social avatar

poll: which is your favourite manual (refinement) program?🧠🖥️

Polls don’t have enough options so detailed answers would be great 😃:

1: Klusters
2: Mclust
3: Offline Sorter
4: Phy
5: Spike Sort 3D
6: Tint (I didn't find a link describing the software)
7: Other
8: None (all automatised!)

(Note: I asked the same poll on the NeuroMethods SpikeSorting channel)

elduvelle_neuro, to random
@elduvelle_neuro@neuromatch.social avatar

question: what is the longest that you have seen rats stay immobile for a reward?
For me: ~6s but I wonder how much we can push it…

elduvelle_neuro, to random
@elduvelle_neuro@neuromatch.social avatar

My dream goal on here is to attract enough so that we can debate things like which drives to use, nichrome or platinum wire, what gold-plating impedance, Vaseline or kwik-sil for surgery, tetrodes in or out of brain, going backwards during screening or not, which is the best recording system, rats vs mice (rats, ofc), etc.

So please tell your colleagues to join! (Or they can also join the slack but that’s less fun)

Claudio11, to Neuroscience Italian

Is anyone in the neuroscience field using kilosort 3 through spike interface for spike sorting available to help me with some issues/questions? I am currently trying to set up a pipeline using SpikeInterface but am running through some issues.

elduvelle,
@elduvelle@neuromatch.social avatar

@Claudio11 it’s unrelated to Mastodon - it is a slack platform: https://neuromethods.slack.com/
(Have you ever used slack?)

If you have an academic email you could try to create an account with that and it might work, because it has some pre-approved domains.
If that doesn’t work, I’ll be happy to send you an invite link by direct message.

The slack is a platform where scientists can ask technical questions to other scientists. In general there will be at least 1 person who can answer your question - although we do need more people on there!

macaskillaf, to random

thinking about making a set of dlx creOFF AAV constructs a la @JDimidschstein and @sohallab. before i do - has anyone got a stash? initially gfp / chr2 but also likely switch gfp/dtomato too. for some 'NOT x' experiments. would be nice if they already existed!

macaskillaf,

thinking about making a set of dlx creOFF AAV constructs a la @JDimidschstein and @sohallab. before i do - has anyone got a stash? initially gfp / chr2 but also likely switch gfp/dtomato too. for some 'NOT x' experiments. would be nice if they already existed! HT @elduvelle for the hashtags!

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