@mike_honey_@aus.social
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mike_honey_

@mike_honey_@aus.social

Data Visualisation and Data Integration specialist - Melbourne, Australia
tiktok.com/@mike_honey_
#covid19 #australia #fedi22

This profile is from a federated server and may be incomplete. Browse more on the original instance.

DenisCOVIDinfoguy, to auscovid19
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VIC COVID weekly update: 1 August

🔸Federal data

🔹New PCR cases: 518* (-584)
🔹Deaths: 0 (-43)
🔹Total deaths: 8,276 (+0)
🔹Hospital: 106** (-12)
🔹ICU: 4** (+2)

  • PCR tests only
    ** 7 day rolling average

@auscovid19

Source: https://covidlive.com.au/vic

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for VIC (log axis):

DenisCOVIDinfoguy, to auscovid19
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Queensland COVID Weekly Update: 1 August 2023

🔸Federal data

🔹New cases: 1,344 (-119)
🔹Deaths: 0 (+0)
🔹Total deaths: 3,075 (+0)
🔹Hospital: 133 (-26)
🔹ICU: 2 (+0)

@qldhealth @AnnastaciaMP @auscovid19

Source: https://www.abc.net.au/news/2023-08-04/covid-19-july-case-numbers-from-australia-states-and-territories/102687898

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for QLD (log axis):

DenisCOVIDinfoguy, to auscovid19
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SA COVID weekly update: 28 July to 3 August

🔸Federal data

🔹New cases: 526 (+45)
🔹Deaths: 0 (-30)
🔹Total deaths: 1,573 (+0)
🔹Hospital: 48 (+0)
🔹ICU: 5 (+4)

@auscovid19

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for SA (log axis):

DenisCOVIDinfoguy, to auscovid19
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WA COVID weekly update: 28 July to 3 August

🔹New cases: 517 (-180)
🔹Deaths: 11 (-49)
🔹Total deaths: 1,210 (+11)
🔹Active cases: 280 (-88)
🔹Hospital: 61 (-39)
🔹ICU: 2 (+0)

@auscovid19

Source: https://health.wa.gov.au/News/Media-releases-listing-page

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for WA (log axis):

DenisCOVIDinfoguy, to auscovid19
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ACT COVID weekly update: 28 July to 3 August

🔹New cases: 188 (+12)
🔹Deaths: 2 (+1)
🔹Total deaths: 266 (+2)
🔹Hospital: 11 (-9)
🔹ICU: 0 (-1)
🔹Vent: 0 (-1)

Sadly, ACT Health has been notified of 2 COVID-19 related death during this reporting period; 2 men in their 90’s.

@auscovid19

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for the ACT (log axis):

Private
mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for NSW (log axis):

mike_honey_, to australia
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The Provisional Mortality statistics have been updated by the Australian Bureau of Statistics (ABS), up to April 2023.

Here are the deaths where the underlying cause of death was certified by a doctor as COVID-19 (13,389 deaths). Each individual death is represented by a single point, spread out across the years of the pandemic.

The latest wave of COVID-19 deaths after April are still to be added, but you can already see the density starting to increase during April.

This visual is also available as a vertical scrolling page, which gives a more detailed perspective:
https://mike-honey.github.io/australia-covid-19-death-toll.html

@auscovid19

Interactive Australian covid stats dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-au-vaccinations#death-toll-page

mike_honey_, to random
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Here's an animated map showing the spread of EG.5.1 around the world.

The earliest sample of EG.5.1 was recorded in Jakarta, Indonesia, in mid-March. From there it spread quite quickly to northern Asia and central Europe, then across North America and around the world.

Locations are approximate - typically country and state/province.

Here's a link to download the video file - feel free to share anywhere:
https://github.com/Mike-Honey/covid-19-genomes/raw/main/covid-19-genomes-map-EG-5-1.mp4

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

video/mp4

mike_honey_, to australia
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Here's the latest variant picture for the EG.5.* variant in Australia. There are signs of growth in Queensland (7%), NSW (7%) and SA (6%).

Note data sharing from some states and territories lags significantly - the dismal routine:

  • Victoria - no report for 4 weeks
  • Tasmania - no report since mid-May
  • NT - only 6 random samples reported since April 2022

@auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

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mike_honey_,
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@AnneLeditschke @auscovid19 From around when Omicron emerged, it was generally put at around 3 days. I do wonder if that has shortened since, as variant evolution has continued within the Omicron family.
https://www1.racgp.org.au/newsgp/clinical/how-does-omicron-compare-with-delta

DenisCOVIDinfoguy, to auscovid19
@DenisCOVIDinfoguy@aus.social avatar

Tasmania COVID weekly update: 21 July to 27 July

🔹New cases: 209 (-65)
🔹Deaths: 1 (-1)
🔹Total deaths: 305 (+1)
🔹Hospital: 7 (-8)
🔹ICU: 1 (-1)

@auscovid19

Source: https://health.tas.gov.au/health-topics/coronavirus-covid-19/current-risk-level-and-statistics/weekly-statistics

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for Tasmania (log axis):

DenisCOVIDinfoguy, to auscovid19
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ACT COVID weekly update: 21 July to 27 July

🔹New cases: 176 (-4)
🔹Deaths: 1 (-1)
🔹Total deaths: 264 (+1)
🔹Hospital: 20 (+8)
🔹ICU: 1 (+1)
🔹Vent: 1 (+1)

Sadly, ACT Health has been notified of one COVID-19 related death during this reporting period; a woman in her 90’s.

@auscovid19

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for the ACT (log axis):

DenisCOVIDinfoguy, to auscovid19
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VIC COVID weekly update: 21 July to 27 July

🔹New PCR cases: 1,102* (+633)
🔹Deaths: 43 (-2)
🔹Total deaths: 8,276 (+43)
🔹Hospital: 122** (+1)
🔹ICU: 3** (-3)

  • PCR tests only

** 7 day rolling average

@auscovid19

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for Victoria (log axis):

Private
mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for NSW (log axis):

Private
mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 It seems this report has been changed to a monthly update.

Here's the latest data via GISAID. Recent sample sizes are very small, but it looks like the "Deltacron" XBC.* variant has been growing (multiple sub-lineages).

image/png

mike_honey_, to australia
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Here's an update on my metric for Australia and it's states and territories:

"Days since Health Leadership faced the public on COVID".

I'm tracking the last date that CMOs/CHOs etc in each jurisdiction last held a press conference and took questions from the media on COVID.

QLD CHO Dr John Gerrard held a press conference on 15 July:
https://www.abc.net.au/news/2023-07-15/influenza-a-b-c-d-explained-flu-season/102599454

@auscovid19
🧵

DenisCOVIDinfoguy, to auscovid19
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Queensland COVID Weekly Update: 18 July 2023

🔸Federal data

🔹New cases: 1,631 (-126)
🔹Deaths: 7 (+7)
🔹Total deaths: 3,075 (+7)
🔹Hospital: 163 (-31)
🔹ICU: 2 (-2)

@qldhealth @AnnastaciaMP @auscovid19

Source: https://www.abc.net.au/news/2023-07-21/covid-19-case-numbers-from-australia-states-and-territories/102630978

mike_honey_,
@mike_honey_@aus.social avatar

@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for Queensland (log axis):

DenisCOVIDinfoguy, to auscovid19
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WA COVID weekly update: 14 July to 20 July

🔹New cases: 751 (-183)
🔹Deaths: 4 (-2)
🔹Total deaths: 1,139 (+4)
🔹Active cases: 444 (-61)
🔹Hospital: 104 (+9)
🔹ICU: 3 (+0)

@auscovid19

Source: https://health.wa.gov.au/News/Media-releases-listing-page

mike_honey_,
@mike_honey_@aus.social avatar

@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for WA (log axis):

mike_honey_, to australia
@mike_honey_@aus.social avatar

Here's the latest variant picture for the EG.5.1 variant in Australia. There are signs of growth in Queensland (6%), NSW (5%) and SA (5%).

EG is an alias for XBB.1.9.2.1, from the "Hyperion" clan. Along with several prior generations of mutations, EG.5 added the Spike F456L mutation, then EG.5.1 itself added the Spike Q52H mutation.

EG.5 was the first lineage mentioned last month's edition of the Neher Lab's variant report:
https://github.com/neherlab/SARS-CoV-2_variant-reports/blob/main/reports/variant_report_latest_draft.md

EG.5 was recently designated a "Variant Under Monitoring" (VUM) by the WHO.
https://www.who.int/activities/tracking-SARS-CoV-2-variants

Note data sharing from some states and territories lags significantly - the dismal routine:

  • Victoria - no report for 3 weeks
  • Tasmania - no report since mid-May
  • NT - only 6 random samples reported since April 2022

@auscovid19

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

mike_honey_,
@mike_honey_@aus.social avatar

@noyes @auscovid19 Stuart Turville at UNSW is a good source on this topic. He sometimes shares some early results on Twitter:
https://twitter.com/StuartTurville/with_replies

DenisCOVIDinfoguy, to auscovid19
@DenisCOVIDinfoguy@aus.social avatar

ACT COVID weekly update: 14 July to 20 July

🔹New cases: 180 (-24)
🔹Deaths: 2 (-1)
🔹Total deaths: 263 (+2)
🔹Hospital: 12 (+1)
🔹ICU: 0 (-2)
🔹Vent: 0 (-1)

Sadly, ACT Health has been notified of 2 COVID-19 related deaths during this reporting period; 2 men in their 80’s.

@auscovid19

Source: https://covid19.act.gov.au/updates/act-covid-19-statistics

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for the ACT (log axis):

DenisCOVIDinfoguy, to auscovid19
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NT COVID weekly update: 14 July to 20 July

🔹New Cases: 50 (+4)
🔹Deaths: 0 (+0)
🔹Total deaths: 105 (+0)
🔹Hospital: 2 (-8)

@auscovid19

Source: https://health.nt.gov.au/covid-19/data

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for the NT (log axis):

DenisCOVIDinfoguy, to auscovid19
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VIC COVID weekly update: 14 July to 20 July

🔹New PCR cases: 469* (-74)
🔹Deaths: 45 (+6)
🔹Total deaths: 8,234 (+45)
🔹Hospital: 121** (-16)
🔹ICU: 6** (-2)

  • PCR tests only

** 7 day rolling average

@auscovid19

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for Victoria (log axis):

mike_honey_,
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@DenisCOVIDinfoguy @auscovid19 Here's the recent trend in PCR cases for Victoria (7-day average).

It has been unusually volatile lately, but the trend seems to be flat or perhaps starting to rise.

DenisCOVIDinfoguy, to auscovid19
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NSW COVID weekly update: 14 July to 20 July

🔹New cases: 2,262 (-592)
🔹Deaths: 31 (-39)
🔹Total deaths: 7,494 (+31)
🔹Hospital: 902 (-31)
🔹ICU: 15 (-11)

@ChrisMinnsMP @RyanPark_Keira
@NSWCHO @auscovid19

image/png

mike_honey_,
@mike_honey_@aus.social avatar

@DenisCOVIDinfoguy @auscovid19 Here are the recent trends in the key stats for NSW (log axis):

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