mike_honey_, to australia
@mike_honey_@aus.social avatar

Here's the latest variant picture for Queensland, Australia.

As of mid-October, EG.5.* "Eris" (60%) was still dominant.

BA.2.86.* "Pirola" (4%) began rising during October.

@auscovid19
🧵

mike_honey_, to australia
@mike_honey_@aus.social avatar

Here's the latest variant picture for South Australia.

The next challenge to EG.5.* "Eris" (56%) looks like either XBB.1.5.* "Kraken" (16%) or BA.2.86.* "Pirola" (10%), which looks to have started community transmission.

@auscovid19
🧵

mike_honey_, to random
@mike_honey_@aus.social avatar

Here's an animated map showing the spread of the new BA.2.86 "Pirola" variant.

123 samples have been reported so far, over 5 continents (in GISAID (as of a couple of hours ago), based on Nextclade lineage calls).

Locations are approximate - typically country and state/province.


🧵

video/mp4

mike_honey_, to random
@mike_honey_@aus.social avatar

Here's an animated map showing the spread of the new BA.2.86 "Pirola" variant.

23 samples have been reported so far, over 4 continents.

Locations are approximate - typically country and state/province.

Here's a link to download the video file - feel free to share anywhere:
https://github.com/Mike-Honey/covid-19-genomes/raw/main/covid-19-genomes-map-BA-2-86.mp4

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

video/mp4

mike_honey_, to random
@mike_honey_@aus.social avatar

Here's an animated map showing the spread of the new BA.2.86 "Pirola" variant.

Just 5 samples have been reported so far - this shows their spread across time and space.

The tiny dots represent single sequences, the large dot is for the 2 sequences shared from Denmark.

Locations are approximate - typically country and state/province.

Here's a link to download the video file - feel free to share anywhere:
https://github.com/Mike-Honey/covid-19-genomes/raw/main/covid-19-genomes-map-BA-2-86.mp4

Interactive genomic sequencing dataviz, code, acknowledgements and more info here:
https://github.com/Mike-Honey/covid-19-genomes#readme

video/mp4

persagen, to random
@persagen@mastodon.social avatar

WHO classifies EG.5 as COVID-19 variant of interest
https://www.ctvnews.ca/health/who-classifies-eg-5-as-covid-19-variant-of-interest-1.6512001

  • World Health Organization classified EG.5 coronavirus strain circulating in U.S., China as "variant of interest"
  • fast-spreading variant, most prevalent in the U.S.: 17% of cases
  • does not seem to pose more of threat to public health than other variants
  • COVID-19 killed 6.9 million people globally; 768 million confirmed cases
  • WHO declared COVID-19 pandemic 2020-03; ended global emergency 2023-05

persagen,
@persagen@mastodon.social avatar

Addendae 3

Early lab tests suggest new COVID-19 variant BA.2.86 may be less contagious & less immune-evasive than feared
https://www.ctvnews.ca/health/coronavirus/early-lab-tests-suggest-new-covid-19-variant-ba-2-86-may-be-less-contagious-and-less-immune-evasive-than-feared-1.6547033

  • early results: BA.2.86 less contagiou/immune-evasive
  • could change as results updated
  • BA.2.86 (nickname Pirola) radically different than other coronavirus variants
  • 30 changes to spike protein cf. closest ancestor, BA.2, & recently circulating XBB.1.5 lineage
  • not the 2nd wave of Omicron

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