@jekely@biologists.social
@jekely@biologists.social avatar

jekely

@jekely@biologists.social

Professor at the Centre for Organismal Studies (COS), University of Heidelberg, Germany
and at the
Living Systems Institute (LSI), University of Exeter, UK. #neuroscience of marine larvae, #connectomics, #cilia, ciliary swimming, cell and nervous system #evolution, #GPCR, #neuropeptides, #Platynereis, #Trichoplax, #Nematostella, #Schistosoma, #coral #neuroscience #rstat #evolution #fedi22

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jekely, to evolution
@jekely@biologists.social avatar

Still time to sign up to our COS Symposium 2024

"Life in Context: Organismal sensing and adaptation in the natural environment"

in Heidelberg July 22-23, 2024.

Free registration.

https://www.cos.uni-heidelberg.de/en/centre-for-organismal-studies-heidelberg/scientific-events-at-cos/cos-symposia/cos-symposium-2024

with @vincentflora, @NicoleDubilier, @GonzalezLab and many other great speakers

@biology

jekely, to evolution
@jekely@biologists.social avatar

Beautiful new study by Michael Bok, Macali & Garm on the high-resolution eyes of the enigmatic alciopid annelids, from Ponza island.
"Our results show that the eyes of alciopids possess the anatomical, morphological, and physiological properties requisite for high resolution tasks and object vision"
https://doi.org/10.1016/j.cub.2024.02.055
@biology @mikebok

jekely, to Neuroscience
@jekely@biologists.social avatar

We have now published a new and massively extended/reworked preprint of the whole-body larval with over 50 figures

https://www.biorxiv.org/content/10.1101/2024.03.17.585258v1

All the analyses, plots and figures should be reproducible in with the code provided:

https://zenodo.org/doi/10.5281/zenodo.10825370

@zenodo_org

by querying our public database:

https://catmaid.jekelylab.ex.ac.uk

@biology
@biorxivpreprint

jekely,
@jekely@biologists.social avatar

@dpunked Thank you! A bryozoan larva would be nice! Maybe one day we will get there...

jekely, to Neuroscience
@jekely@biologists.social avatar

Press release at @eLife of our paper exploring the mechanism of pressure sensing by UV light sensors in larvae

https://elifesciences.org/for-the-press/5f58b93c/plankton-use-uv-light-sensors-to-detect-pressure-change-and-avoid-getting-swept-away

Luis Alberto Bezares Calderón et al. paper here:
https://elifesciences.org/reviewed-preprints/94306

@biology

jekely,
@jekely@biologists.social avatar

@Sal Thank you! Indeed, the opsin is not the sensor, but we can use a mutation in the opsin gene to disrupt the ciliary superstructure and then we see a phenotype in pressure sensing, and also in UV light sensing, as we previously described: https://elifesciences.org/articles/36440

jekely, to random
@jekely@biologists.social avatar

A beautiful new species of deep-sea nereid with gills on its parapodia.
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0297961

jekely, to random
@jekely@biologists.social avatar

EM stack of a golgi ribbon in a glial cell of , from Benvenuto et al.,:
"Evolution of the ribbon-like organization of the Golgi apparatus"
with small contribution from our lab.
https://www.sciencedirect.com/science/article/pii/S2211124724001190?via%3Dihub

Golgi ribbon in a glial cell of the 3-day-old Platynereis dumerilii larva

yoginho, to Life
@yoginho@spore.social avatar

Here's a little cheat sheet, by Marcus and me, #life vs. #machine.

What would you add?

jekely,
@jekely@biologists.social avatar

@yoginho Life shows nanoscale motions that can be detected by atomic force microscope
https://www.pnas.org/doi/abs/10.1073/pnas.1415348112

jekely, to Neuroscience
@jekely@biologists.social avatar

Interesting review by Maria Sachkova on the nervous system and the challenges of studying it.
https://doi.org/10.1111/ede.12472
@biology

jekely, to heidelberg
@jekely@biologists.social avatar

Our SEM finally made it across the Channel from Exeter to .

It took us several months of bureaucracy, including over 200 emails to sort out the paperwork.

Nobody involved had a clue about the customs documents.The UK and EU branches of the microscope company, the two universities, the shipping company...
If you scale this up to the entire UK economy, it is easy to see how massively damaging must have been.

jekely, to random
@jekely@biologists.social avatar

Registration is now open for this exciting lecture course on Organisms Across Scales.

I will speak about the latest incarnation of the larval

https://meetings.embo.org/event/24-marine-imaging

jekely, to science
@jekely@biologists.social avatar

Our new EU PhD Network is hiring! We have 12 PhD positions in Germany, France, UK, Italy and Sweden.

The broad topic is evolution of sensory cell types in animal diversity: multidisciplinary training in 3D cellular reconstruction (volume EM), multimodal data analysis and science outreach.

https://euraxess.ec.europa.eu/jobs/189511

Please share!

If you are interested in a PhD in , comparative etc. check out the projects and apply!

elduvelle, (edited ) to academia
@elduvelle@neuromatch.social avatar

People who write : do you write about

  1. projects that you’ve already almost completed (hiding the fact that they’re almost completed, so that you can use the funding for completely new projects), or
  2. new projects that you haven’t really started yet (for which you might just have some preliminary data)?

Do you think 1) is unethical? Do you think 1) is necessary? Do you think 1) has the highest chances of funding? Please comment :)

jekely,
@jekely@biologists.social avatar

@cowboycatranch @albertcardona @elduvelle @janbogar @RichardShaw @maartjeoostdijk We also published the lab's publishing policy and new lab members have to agree. We have been publishing in non-corporate venues for many years now and I don't think that the career of people in the lab or my career suffered from this. Integrity, openness and the quality of our science is all that matter to us, not titles or magic tokens https://www.cos.uni-heidelberg.de/en/research-groups/gaspar-jekely/our-approach-to-publication

albertcardona, (edited ) to Neuroscience
@albertcardona@mathstodon.xyz avatar

"The brain: what for?" – my seminar for "everyone else" at the . Featuring brainless maggots and more.

https://www.youtube.com/watch?v=mcZwH5MYkFU

jekely,
@jekely@biologists.social avatar

@brembs @albertcardona
But, please, please stop spreading this urban legend that adult sea squirts do not have behaviour and a nervous system. They do, furthermore: "most parts of the ascidian larval CNS, except for the tail nerve cord, are maintained during metamorphosis and recruited to form the adult CNS"

some refs: https://www.nature.com/articles/nature09631
https://cdnsciencepub.com/doi/abs/10.1139/z04-177

jekely, to random
@jekely@biologists.social avatar

Our collaborative paper on "Ciliary propulsion and metachronal coordination in reef coral larvae" is out in its version of record

https://journals.aps.org/prresearch/abstract/10.1103/PhysRevResearch.5.L042037

jekely, to microscopy
@jekely@biologists.social avatar

Nice review by Kirsty Wan and Rebecca Poon from Exeter on the diverse patterns and mechanisms of multiciliary coordination.
https://doi.org/10.1016/j.ceb.2023.102286

jekely, to random
@jekely@biologists.social avatar

The Living Systems Institute (LSI) in Exeter is appointing now.
From Senior Lecturer to Professor level affiliated with the Faculty of Health and Life Sciences to drive world-leading research in interdisciplinary life science.
More information here: https://tinyurl.com/bdh7utx8

jekely, to Neuroscience
@jekely@biologists.social avatar

Our group has several 3y+ openings at the Centre for Organismal Studies at Heidelberg University. Come and join us in Heidelberg to study eye evolution, , by etc.
https://adb.zuv.uni-heidelberg.de/info/INFO_FDB$.startup?MODUL=LS&M1=1&M2=0&M3=0&PRO=34018

elduvelle, (edited ) to mastodon
@elduvelle@neuromatch.social avatar

Anyone knows of a app that allows you to do drafts one or more ? (Not facebook - actual threads)
@feditips ? 🙏

Edit: to be more specific: I’d like to be able to create a thread in the app, so a sequence of posts (not just 1 post) that can each have text, images etc. and are in a specific order, and if need be save it and come back to update it later, and eventually post it.
Also, I am using iOS and desktop (Windows). If you check the comments you’ll see that Fedilab seems to allow this but for Android.

Thanks for all the input so far!

jekely,
@jekely@biologists.social avatar

@elduvelle @feditips

You can do this with the toot tool:
https://toot.bezdomni.net/introduction.html

Author your complete thread in one .sh file and post it with all media etc. You can reply as many times as you want.

#!/bin/bash

toot post "toot 1" > toot_id.txt -m path/to/image.png -d "My image"

id=$(grep -oE '[0-9]+$' toot_id.txt) && echo $id

toot post --reply-to $id "reply to toot 1" -v 'unlisted' -m path/to/image2.png -d "My 2nd image"

toot post --reply-to $id "second reply to toot 1" -v 'unlisted'

BorisBarbour, to random
@BorisBarbour@mastodon.social avatar

Comically, tragically predictable.

https://www.researchprofessionalnews.com/rr-news-uk-politics-2023-8-post-brexit-talent-visa-gets-just-three-applicants-in-two-years/

jekely,
@jekely@biologists.social avatar

And if you get an ERC starter you will have to pay your entire salary from it, and you won't have money left to set up a decent team, defying the purpose of the grant. The ERC starting grant is considered a fellowship in the UK. #uk #academia

jekely,
@jekely@biologists.social avatar

And if you get an ERC starter you will have to pay your entire salary from it, and you won't have money left to set up a decent team, defying the purpose of the grant. The ERC starting grant is considered a fellowship in the UK.

DacksLabECB, to random

Recommended by a great scientist and great person, @jekely, I'm giving this platform a try.

Please follow or connect or whatever we do here :) Say hi!

jekely,
@jekely@biologists.social avatar

@DacksLabECB Thanks for joining, it is great to see you here! You could start by posting one (or more) introductions (with hashtag), which many people follow and can then easily see you and what you do/who you are. I also suggest to check out @feditips to learn about how the Fediverse works,

jekely, to microscopy
@jekely@biologists.social avatar

From our SEM collection. A nemertean pilidium larva. Image By Juergen Berger.

mick, to Neuroscience
@mick@fediscience.org avatar

people! How do you decide which journals to submit to? What factors to you consider? Excluding glam mags like Nature, Science, etc. What is your favourite journal? I always found J Neurosci reviews a bit savage so reluctant to go there. Other options?

jekely,
@jekely@biologists.social avatar

@eLife is $2000

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