niksirbi, to random
@niksirbi@neuromatch.social avatar

Anyone here working on ?

You may be interested in the free and open-source Python 🐍 package I’m currently working on, together with @adamltyson @bd_peri and others.

It’s called movement, and it’s made for analysing the pose tracks produced by pose estimation frameworks, like and .

Website: https://movement.neuroinformatics.dev
GitHub: https://github.com/neuroinformatics-unit/movement

It’s still in early development 🏗️ but we appreciate feedback/feature requests.

Check out the detailed thread on our team’s mastodon account: @neuroinformatics

J_Exp_Biol, to science
@J_Exp_Biol@biologists.social avatar

Dung beetles are remarkably adept at rolling dung balls in perfectly straight lines, but now Nienke Bijma & co have discovered that the tenacious beetles are thrown off course and forced to follow channels in uneven terrain and often lose control of their precious balls of dung

https://journals.biologists.com/jeb/article/227/1/jeb247121/341253

Read the full research at https://journals.biologists.com/jeb/article/227/1/jeb245920/341256

elduvelle, (edited ) to mastodon
@elduvelle@neuromatch.social avatar

Hey all, still as part of the Movement, and because we’re a bunch of honest people, let’s list all the things we think could be improved here on :
(I’ll start - in no specific order. I've also added workarounds when I knew about them)
(See this other post for the positive aspects)

[1] No feedback on your boosts: do people like them? boost them? 🤷​
[2] You can’t easily see all the answers to someone else’s post
[unless you go to their instance's website]
[3] Some great-looking accounts haven’t actually been active for a long time
[but you can see "last active date" on your "follows and followers" Settings]
[4] you can't easily quote posts
[except with some apps, also this is coming soon in Masto!]
[5] You can easily miss very relevant content
[a customizable algo might be coming at some point on our instance!]
[6] (very specific to me) there are not enough or people
[if you know any, tell them to come here!]
[7] the new search is great but doesn’t search ALL of Mastodon’s public posts
[you can always do a search from outside, say with DuckDuckGo]
[8] you can't easily see only the posts of a profile
[but you can use https://justmytoots.com/ for this]
[9] …?

Please do add your own!

Edit: I updated the list, thanks to contributions of @diazona, @thefalcon 🙏​

strawman, to Animal

"High Resolution Outdoor Videography of Insects Using Fast Lock-On Tracking"

We glue a tiny reflector on a bee. Using its reflection, robotic Fast Lock-On (FLO) tracking keeps a telescope focused on the bee flying in the wild. FLO also works from a drone.

Check out the movies!

Huge thanks to the for supporting this work at @unifreiburg

https://www.biorxiv.org/content/10.1101/2023.12.20.572558

elduvelle_neuro, to random
@elduvelle_neuro@neuromatch.social avatar

The application deadline has been extended for this conference to Oct 22:
Bridging Diverse Perspectives on the Mechanistic Basis of Foraging
Date: February 25 - 28, 2024
Where: I’m guessing Janelia Research Campus, Ashburn, Virginia, USA

No fees. Hotel + meals covered. Travel support available!

volephd, to academicchatter
@volephd@fediscience.org avatar

I will soon start again to look for another position.
Are there already some established hashtags that I could follow?
Both general academic ones and specific for and/or would be appreciated
So far I'm aware of & @academicjobs
@academicchatter

elduvelle,
@elduvelle@neuromatch.social avatar

@volephd
I see in your profile so I would say follow !
If you’re looking in the UK I’d strongly recommend this position (feel free to ask me more info about it!)
https://www.nature.com/naturecareers/job/12804781/research-associate/

roaldarboel, to Neuroscience
@roaldarboel@neuromatch.social avatar

Just moved instance (hi !) - so I guess it's time!

🎓 I'm Mikkel, I'm a PhD student at University of Sussex doing , currently working on sleep in insects.

🗺️ A winding road has taken me from Sports Science (biomechanics, motor control and learning) to , thinking about brains in the context of ecology and evolution.

🔓 I'm enthusiastic about , developing tools with , , and beyond.

🏕️ Outside of work, I love spending time in the outdoors, from caves to mountain tops. I also enjoy any type of sport, photography, singing, my piano and books.

Looking forward to get to know you!

trose_neuro, to Neuroscience German

📢Join IMPRS for Brain and Behavior in Bonn, Germany, to pursue a fully-funded in - the study of neural basis of animal behavior.
🔔Apply before: November 1, 2023
📷https://imprs-brain-behavior.mpg.de

https://twitter.com/IMPRSBrainBehav/status/1700077341265867246?s=20

elduvelle_neuro, to Neuroscience
@elduvelle_neuro@neuromatch.social avatar

What is the difference between Behavioural and ? 🧠

kofanchen,
@kofanchen@drosophila.social avatar

@elduvelle_neuro
A fruitfly walking back and forward in a glass tube during locomotor recording with neurogenetic interventions is behavioural but probably not ; a closest case for the latter I can think of is the RFID tagged bumble tracking in its natural hive...but I am not aware anyone record neural activity for this

manisha,
@manisha@neuromatch.social avatar

@elduvelle_neuro I agree with @beneuroscience @kofanchen and @alicia_izquierdo here. One very broad way to look at it could be the classic nature (genes, evolution --> ) vs nurture (environment, epigenetics --> behavioral )?

To slightly rephrase what others have stated - studies the mechanisms that the brain has evolved to function in its natural conditions. If I were to draw a venn diagram for this, there could be/is an intersection between the 2 sets (behavioral neuroscience and neuroethology) but they are 2 different sets. There's based on response to natural statistics of the animal's environment that I think lies at the intersection. While there may be a behavioral response to a stimulus in the lab, it doesn't mean that the stimulus even exists in the statistics of the animal's natural environment.

In a lab, you can rewire the auditory cortex of a ferret's brain and they can start "seeing" with their auditory cortex but it doesn't mean that in a "normal" animal's brain that's what happens.

https://www.nature.com/articles/35009043
https://www.nytimes.com/2000/04/25/science/rewired-ferrets-overturn-theories-of-brain-growth.html
https://web.mit.edu/surlab/publications/Newton_Sur04.pdf

I think of it this way -- there could be several mechanisms to achieve the same output (behavior) in a lab setting but that doesn't mean that the brain actually uses any or all of those mechanisms in its natural environment. Heck, even in the natural environment the brain could (and very likely does) exhibit where distinct structural units could give rise to the same function (behavior) under different circumstances.

Also, given the diversity of responses to the OP, adding @neurobuzz 🙂​

MPIforBI, to random German
@MPIforBI@wisskomm.social avatar

Nightingales are great singers, but how well can they hit the tone? 🎶 Scientists from Daniela Vallentin’s group at our institute found that nightingales can imitate the pitch of whistles in real time! Read more: https://www.bi.mpg.de/news/2023-07-vallentin

viveknityananda, to Neuroscience

Looking forward to the The Future of Neuroethology Webinar Series!

Talks by early career researchers in neuroethology -sign up to be a speaker, nominate great folks or come and listen!

Register here: https://forms.gle/pMyd1MJ5Q886u8Z16

Nominate (or self-nominate) a speaker
here: https://forms.gle/oer8yVeYGhWiMGU89

(Deadline June 30th 2023)

#neuroscience #neuroethology #animalbehaviour #animalbehavior #ECR #Talks #webinar

TrackingActions, to random

I’m super pumped to release models: for animal behavior, they can be zero shot for many, and if you need to fine tune, it’s 10X less data and 2X performance over the latest best pose models - please road test it!
It’s in Google Colab, so zero install needed✨

Blog: https://deeplabcut.medium.com/super-animal-models-are-getting-into-the-dlc-model-zoo-56962955ed2d
Colab: https://colab.research.google.com/github/DeepLabCut/DeepLabCut/blob/master/examples/COLAB/COLAB_DLC_ModelZoo.ipynb

karihoffman,

@TrackingActions @desdemonafricker @cogneurophys This looks fantastic! Does it generate 3D pose (multi-camera inputs?)

We have loads of macaque video we’d gladly contribute. Our issue has been human bandwidth for labeling and getting 3-D pose. What’s tricky for us is that the camera captures mostly outward-facing activity (on touchscreens at the periphery).

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